EnhancerDB
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  3. rs530967991[chr16:85241880]
Enhancers that have rs530967991[chr16:85241880]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs530967991[chr16:85241880]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85240143 85242565 TCF7L2 GTRD no Colon (HCT116) 21721156
chr16 85241167 85241928 ZNF274 GTRD no Blood (GM12878) 21721165
chr16 85241173 85241935 ZNF274 GTRD no Bone Marrow (K562) 21721166
chr16 85241187 85241953 ZNF274 GTRD no Bone Marrow (K562) 21721168
chr16 85241351 85242201 ZNF274 GTRD no Bone Marrow (K562) 21721172
chr16 85241487 85241950 ZNF274 GTRD no Bone Marrow (K562) 21721174
chr16 85241608 85242808 TCF7L2 GTRD no Colon (HCT116) 21721175
chr16 85241666 85242790 ZNF143 GTRD no Epithelial (MCF-7) 21721176
chr16 85241683 85242768 TCF7L2 GTRD no Colon (HCT116) 21721177
chr16 85241684 85242194 TCF7L2 GTRD no Colon (HCT116) 21721178
chr16 85241684 85242667 TCF7L2 GTRD no Colon (HCT116) 21721179
chr16 85241781 85242762 ZNF143 GTRD no Epithelial (MCF-7) 21721180
chr16 85241813 85242752 ZNF143 GTRD no Epithelial (MCF-7) 21721181
chr16 85241830 85242676 TCF7L2 GTRD no Colon (HCT116) 21721182
chr16 85241875 85241880 TFAP2A TRANSFAC yes 12032791
chr16 85241875 85241881 MZF1 JASPAR yes 12032792
Genes associated with rs530967991[chr16:85241880], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More