EnhancerDB
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  3. rs531239892[chr6:108909082]
Enhancers that have rs531239892[chr6:108909082]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 108896085 108921787 enh23478
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs531239892[chr6:108909082]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 108909079 108909100 IRF1 JASPAR yes 104180638
chr6 108909082 108909096 SPIC JASPAR yes 104180639
Genes associated with rs531239892[chr6:108909082], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More