EnhancerDB
  1. Home
  2. SNP
  3. rs531300898[chr1:90372110]
Enhancers that have rs531300898[chr1:90372110]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90347765 90388035 enh484
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs531300898[chr1:90372110]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90372099 90372655 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107813791
chr1 90372104 90372125 REST JASPAR yes 30632876
chr1 90372104 90372694 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107813792
chr1 90372110 90372130 TP63 JASPAR yes 30632877
Genes associated with rs531300898[chr1:90372110], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More