EnhancerDB
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  3. rs531398408[chr1:43401340]
Enhancers that have rs531398408[chr1:43401340]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43394865 43408895 enh296
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs531398408[chr1:43401340]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43400793 43401453 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107803001
chr1 43401337 43401356 PAX5 JASPAR yes 28468034
Genes associated with rs531398408[chr1:43401340], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More