EnhancerDB
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  3. rs531542584[chr17:2797239]
Enhancers that have rs531542584[chr17:2797239]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs531542584[chr17:2797239]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2795210 2800120 ZNF143 GTRD no Epithelial (MCF-7) 21739739
chr17 2795210 2800120 ZNF143 GTRD no Epithelial (MCF-7) 108231314
chr17 2795895 2799236 TCF7L2 GTRD no Colon (HCT116) 21739754
chr17 2795895 2799236 TCF7L2 GTRD no Colon (HCT116) 108231342
chr17 2797227 2797248 ZNF263 JASPAR yes 52783502
chr17 2797228 2797243 NR2C2 JASPAR yes 52783503
chr17 2797230 2797251 ZNF263 JASPAR yes 52783504
chr17 2797231 2797241 TBR1 JASPAR yes 52783505
chr17 2797231 2797242 TBX20 JASPAR yes 52783506
chr17 2797231 2797242 TBX2 JASPAR yes 52783507
chr17 2797232 2797242 TBX21 JASPAR yes 52783508
chr17 2797235 2797256 ZNF263 JASPAR yes 52783509
Genes associated with rs531542584[chr17:2797239], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More