EnhancerDB
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  3. rs531973645[chr16:4339828]
Enhancers that have rs531973645[chr16:4339828]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs531973645[chr16:4339828]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4335970 4340905 TCF7L2 GTRD no Colon (HCT116) 21686304
chr16 4339547 4340798 ZNF143 GTRD no Epithelial (MCF-7) 21686374
chr16 4339548 4340449 ZNF143 GTRD no Epithelial (MCF-7) 21686375
chr16 4339550 4340186 TCF7L2 GTRD no Colon (HCT116) 21686376
chr16 4339565 4340260 ZNF143 GTRD no Epithelial (MCF-7) 21686377
chr16 4339572 4340204 TCF7L2 GTRD no Colon (HCT116) 21686378
chr16 4339573 4340621 ZNF143 GTRD no Epithelial (MCF-7) 21686379
chr16 4339674 4340351 TCF7L2 GTRD no Colon (HCT116) 21686380
chr16 4339784 4340463 ZNF143 GTRD no Epithelial (MCF-7) 21686381
chr16 4339815 4339830 MEF2C JASPAR yes 9267089
chr16 4339816 4339831 MEF2A JASPAR yes 9267090
chr16 4339817 4339829 MEF2A JASPAR yes 9267091
chr16 4339817 4339829 MEF2B JASPAR yes 9267092
chr16 4339817 4339829 MEF2D JASPAR yes 9267093
Genes associated with rs531973645[chr16:4339828], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More