EnhancerDB
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  3. rs532000822[chr6:16330570]
Enhancers that have rs532000822[chr6:16330570]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16329544 16348350 enh8975
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs532000822[chr6:16330570]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16330559 16330575 GLIS1 JASPAR yes 100288006
chr6 16330560 16330574 GLIS2 JASPAR yes 100288007
chr6 16330560 16330574 GLIS3 JASPAR yes 100288008
chr6 16330560 16330575 ZIC3 JASPAR yes 100288009
chr6 16330569 16330575 LEF1 TRANSFAC yes 100288010
chr6 16330569 16330575 SOX10 JASPAR yes 100288011
Genes associated with rs532000822[chr6:16330570], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More