EnhancerDB
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  3. rs532005087[chr12:65062460]
Enhancers that have rs532005087[chr12:65062460]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs532005087[chr12:65062460]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65062442 65062463 IRF1 JASPAR yes 121423792
chr12 65062446 65062461 IRF9 JASPAR yes 121423793
chr12 65062448 65062469 IRF1 JASPAR yes 121423794
chr12 65062452 65062466 ONECUT1 JASPAR yes 121423795
chr12 65062452 65062466 ONECUT2 JASPAR yes 121423796
chr12 65062452 65062466 ONECUT3 JASPAR yes 121423797
chr12 65062453 65062465 IRF1 JASPAR yes 121423798
chr12 65062453 65062474 IRF1 JASPAR yes 121423799
chr12 65062454 65062475 IRF1 JASPAR yes 121423800
chr12 65062455 65062476 IRF1 JASPAR yes 121423801
chr12 65062457 65062478 IRF1 JASPAR yes 121423802
chr12 65062458 65062479 IRF1 JASPAR yes 121423803
chr12 65062459 65062474 FOXP1 JASPAR yes 121423804
chr12 65062459 65062480 IRF1 JASPAR yes 121423805
chr12 65062460 65062475 FOXP1 JASPAR yes 121423806
Genes associated with rs532005087[chr12:65062460], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More