EnhancerDB
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  3. rs532058005[chr1:234888565]
Enhancers that have rs532058005[chr1:234888565]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234877045 234913055 enh12796
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs532058005[chr1:234888565]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234888001 234888650 ZNF143 GTRD no Epithelial (MCF-7) 21397568
chr1 234888548 234888569 ZNF263 JASPAR yes 36311403
chr1 234888553 234888574 ZNF263 JASPAR yes 36311404
chr1 234888556 234888577 ZNF263 JASPAR yes 36311405
chr1 234888557 234888568 TBX20 JASPAR yes 36311406
chr1 234888558 234888566 TBX15 JASPAR yes 36311407
chr1 234888562 234888567 ETS2 TRANSFAC yes 36311409
Genes associated with rs532058005[chr1:234888565], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More