EnhancerDB
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  3. rs532259971[chr6:88437848]
Enhancers that have rs532259971[chr6:88437848]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs532259971[chr6:88437848]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88437828 88437849 IRF1 JASPAR yes 103325695
chr6 88437828 88437849 ZNF263 JASPAR yes 103325696
chr6 88437832 88437853 IRF1 JASPAR yes 103325697
chr6 88437832 88437853 ZNF263 JASPAR yes 103325698
chr6 88437836 88437857 IRF1 JASPAR yes 103325699
chr6 88437836 88437857 ZNF263 JASPAR yes 103325700
chr6 88437840 88437861 IRF1 JASPAR yes 103325701
chr6 88437840 88437861 ZNF263 JASPAR yes 103325702
chr6 88437844 88437865 IRF1 JASPAR yes 103325703
chr6 88437844 88437865 ZNF263 JASPAR yes 103325704
chr6 88437848 88437869 IRF1 JASPAR yes 103325705
chr6 88437848 88437869 ZNF263 JASPAR yes 103325706
Genes associated with rs532259971[chr6:88437848], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More