EnhancerDB
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  3. rs532334290[chr12:53960551]
Enhancers that have rs532334290[chr12:53960551]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53952154 53966435 enh2368
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs532334290[chr12:53960551]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53960534 53960554 RREB1 JASPAR yes 120991795
chr12 53960535 53960556 IRF1 JASPAR yes 120991798
chr12 53960539 53960551 IRF1 JASPAR yes 120991799
chr12 53960539 53960553 IRF7 JASPAR yes 120991800
chr12 53960546 53960552 LEF1 TRANSFAC yes 120991801
chr12 53960546 53960552 SOX10 JASPAR yes 120991802
chr12 53960546 53960561 FOXP1 JASPAR yes 120991803
Genes associated with rs532334290[chr12:53960551], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More