EnhancerDB
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  3. rs532476745[chr1:172325552]
Enhancers that have rs532476745[chr1:172325552]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172318125 172332422 enh12370
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs532476745[chr1:172325552]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172325548 172325559 HOXC13 JASPAR yes 33125377
chr1 172325549 172325559 HOXA13 JASPAR yes 33125378
chr1 172325549 172325559 HOXB13 JASPAR yes 33125379
chr1 172325549 172325559 HOXD13 JASPAR yes 33125380
chr1 172325551 172325555 TEAD2 TRANSFAC yes 33125381
chr1 172325551 172325556 TBP TRANSFAC yes 33125382
chr1 172325551 172325557 TFIID TRANSFAC yes 33125383
Genes associated with rs532476745[chr1:172325552], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More