EnhancerDB
  1. Home
  2. SNP
  3. rs532617592[chr3:58026964]
Enhancers that have rs532617592[chr3:58026964]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs532617592[chr3:58026964]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58026946 58026967 IRF1 JASPAR yes 2668175
chr3 58026950 58026964 IRF8 JASPAR yes 2668178
chr3 58026950 58026965 IRF9 JASPAR yes 2668179
chr3 58026956 58026970 IRF8 JASPAR yes 2668180
chr3 58026963 58026974 CDX2 JASPAR yes 2668181
Genes associated with rs532617592[chr3:58026964], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More