EnhancerDB
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  3. rs532620224[chr1:41875466]
Enhancers that have rs532620224[chr1:41875466]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs532620224[chr1:41875466]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41875464 41875468 H1TF2 TRANSFAC yes 28386667
chr1 41875464 41875468 NFE TRANSFAC yes 28386668
chr1 41875464 41875468 SRF TRANSFAC yes 28386669
Genes associated with rs532620224[chr1:41875466], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More