EnhancerDB
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  3. rs533278149[chr2:39719608]
Enhancers that have rs533278149[chr2:39719608]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39706845 39747255 enh5443
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
chr2 39719153 39719730 vista31144
VISTA
Transcript factors that have rs533278149[chr2:39719608]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39719168 39719675 EP300 UCSC Txn Factor no Conserved 108431927
chr2 39719182 39719799 NFIC UCSC Txn Factor no Conserved 108431928
chr2 39719260 39719717 TCF12 UCSC Txn Factor no Conserved 108431937
chr2 39719296 39719696 FOS UCSC Txn Factor no Conserved 108431942
chr2 39719314 39719727 CEBPB UCSC Txn Factor no Conserved 108431943
chr2 39719327 39719643 FOSL2 UCSC Txn Factor no Conserved 108431944
chr2 39719595 39719608 ATF4 JASPAR yes 22039474
chr2 39719595 39719608 ATF4 JASPAR yes 73207462
Genes associated with rs533278149[chr2:39719608], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More