EnhancerDB
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  3. rs533298238[chr12:125207472]
Enhancers that have rs533298238[chr12:125207472]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs533298238[chr12:125207472]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125207458 125207742 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21582338
chr12 125207468 125207732 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582339
chr12 125207470 125207482 FOXC2 JASPAR yes 124413529
chr12 125207470 125207482 MEF2D JASPAR yes 124413530
chr12 125207471 125207483 FOXI1 JASPAR yes 124413531
chr12 125207472 125207486 ONECUT2 JASPAR yes 124413532
chr12 125207472 125207486 ONECUT3 JASPAR yes 124413533
chr12 125207472 125207487 FOXP1 JASPAR yes 124413534
chr12 125207472 125207487 HNF1A JASPAR yes 124413535
Genes associated with rs533298238[chr12:125207472], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More