EnhancerDB
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  3. rs533390938[chr6:44044939]
Enhancers that have rs533390938[chr6:44044939]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs533390938[chr6:44044939]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44044932 44044944 NHLH1 JASPAR yes 101821360
chr6 44044933 44044943 MSC JASPAR yes 101821361
chr6 44044933 44044943 NHLH1 JASPAR yes 101821362
chr6 44044933 44044943 TFAP4 JASPAR yes 101821363
chr6 44044933 44044945 TAL1 JASPAR yes 101821364
Genes associated with rs533390938[chr6:44044939], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More