EnhancerDB
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  3. rs533395114[chr1:27978028]
Enhancers that have rs533395114[chr1:27978028]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27968485 27992074 enh178
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs533395114[chr1:27978028]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27978013 27978029 POU4F2 JASPAR yes 27718454
chr1 27978013 27978029 POU4F3 JASPAR yes 27718455
chr1 27978015 27978029 POU4F1 JASPAR yes 27718457
chr1 27978016 27978030 POU4F1 JASPAR yes 27718459
chr1 27978016 27978032 POU4F3 JASPAR yes 27718460
chr1 27978017 27978033 POU4F2 JASPAR yes 27718461
chr1 27978017 27978033 POU4F3 JASPAR yes 27718462
chr1 27978019 27978031 FOXI1 JASPAR yes 27718463
chr1 27978019 27978033 POU4F1 JASPAR yes 27718464
chr1 27978020 27978032 FOXC2 JASPAR yes 27718465
chr1 27978020 27978034 ONECUT2 JASPAR yes 27718466
chr1 27978020 27978034 ONECUT3 JASPAR yes 27718467
chr1 27978023 27978035 FOXI1 JASPAR yes 27718469
chr1 27978024 27978036 FOXC2 JASPAR yes 27718470
chr1 27978026 27978030 YY1 TRANSFAC yes 27718471
chr1 27978026 27978041 FOXA1 JASPAR yes 27718472
chr1 27978027 27978039 FOXI1 JASPAR yes 27718473
chr1 27978027 27978042 FOXP1 JASPAR yes 27718474
chr1 27978028 27978039 FOXP2 JASPAR yes 27718475
chr1 27978028 27978040 FOXC2 JASPAR yes 27718476
chr1 27978028 27978042 FOXF2 JASPAR yes 27718477
Genes associated with rs533395114[chr1:27978028], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More