EnhancerDB
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  3. rs533407017[chr1:10583694]
Enhancers that have rs533407017[chr1:10583694]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10562245 10593475 enh59
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs533407017[chr1:10583694]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10583680 10583701 IRF1 JASPAR yes 26721102
chr1 10583683 10583698 FOXP1 JASPAR yes 26721103
chr1 10583684 10583699 FOXP1 JASPAR yes 26721105
chr1 10583685 10583700 FOXP1 JASPAR yes 26721106
chr1 10583686 10583701 FOXP1 JASPAR yes 26721107
Genes associated with rs533407017[chr1:10583694], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More