EnhancerDB
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  3. rs533416422[chr6:30815260]
Enhancers that have rs533416422[chr6:30815260]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs533416422[chr6:30815260]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30815255 30815265 ALX3 JASPAR yes 101059029
chr6 30815255 30815265 EN2 JASPAR yes 101059030
chr6 30815255 30815265 ESX1 JASPAR yes 101059031
chr6 30815255 30815265 GBX1 JASPAR yes 101059032
chr6 30815255 30815265 GSX1 JASPAR yes 101059033
chr6 30815255 30815265 HOXA2 JASPAR yes 101059034
chr6 30815255 30815265 LBX2 JASPAR yes 101059035
chr6 30815256 30815260 H1TF2 TRANSFAC yes 101059036
chr6 30815256 30815260 NFE TRANSFAC yes 101059037
chr6 30815256 30815260 SRF TRANSFAC yes 101059038
chr6 30815256 30815264 BSX JASPAR yes 101059039
chr6 30815256 30815264 DLX6 JASPAR yes 101059040
chr6 30815256 30815264 MSX1 JASPAR yes 101059041
chr6 30815256 30815264 MSX2 JASPAR yes 101059042
Genes associated with rs533416422[chr6:30815260], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More