EnhancerDB
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  3. rs533469613[chr6:16687746]
Enhancers that have rs533469613[chr6:16687746]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16667585 16734115 enh23080
Liver Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 16687739 16687973 vista51165
VISTA
Transcript factors that have rs533469613[chr6:16687746]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16687732 16687751 CTCF JASPAR yes 70326569
chr6 16687732 16687751 CTCF JASPAR yes 100327571
chr6 16687739 16687750 E2F6 JASPAR yes 70326570
chr6 16687739 16687750 E2F6 JASPAR yes 100327572
chr6 16687740 16687755 FOXP1 JASPAR yes 70326571
chr6 16687740 16687755 FOXP1 JASPAR yes 100327573
chr6 16687742 16687763 IRF1 JASPAR yes 70326572
chr6 16687742 16687763 IRF1 JASPAR yes 100327574
chr6 16687746 16687761 STAT2 JASPAR yes 70326573
chr6 16687746 16687761 STAT2 JASPAR yes 100327575
Genes associated with rs533469613[chr6:16687746], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More