EnhancerDB
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  3. rs533469870[chr12:46830962]
Enhancers that have rs533469870[chr12:46830962]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46820955 46858735 enh14676
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs533469870[chr12:46830962]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46830346 46831424 P63 GTRD no Skin (Keratinocyte) 21541614
chr12 46830357 46831544 P63 GTRD no Skin (Keratinocyte) 21541615
chr12 46830405 46831396 P63 GTRD no Skin (Keratinocyte) 21541616
chr12 46830457 46831414 P63 GTRD no Skin (Keratinocyte) 21541617
chr12 46830532 46831734 TCF7L2 GTRD no Colon (HCT116) 21541618
chr12 46830818 46831422 ZNF274 GTRD no Bone Marrow (K562) 21541619
chr12 46830845 46832062 TCF7L2 GTRD no Colon (HCT116) 21541620
chr12 46830962 46830972 BARHL2 JASPAR yes 120620247
chr12 46830962 46830977 HNF1A JASPAR yes 120620248
Genes associated with rs533469870[chr12:46830962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More