EnhancerDB
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  3. rs533508559[chr1:218646410]
Enhancers that have rs533508559[chr1:218646410]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218644305 218676855 enh12672
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs533508559[chr1:218646410]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218645086 218647040 ZBTB33 GTRD no Lung (A549) 107870355
chr1 218645593 218647190 ZBTB33 GTRD no Lung (A549) 107870356
chr1 218645650 218647045 ZBTB33 GTRD no Lung (A549) 107870357
chr1 218645720 218647182 ZBTB33 GTRD no Lung (A549) 107870358
chr1 218645760 218647561 ZNF143 GTRD no Epithelial (MCF-7) 21380796
chr1 218645760 218647561 ZNF143 GTRD no Epithelial (MCF-7) 107870359
chr1 218645800 218647196 ZBTB33 GTRD no Lung (A549) 107870360
chr1 218645848 218646991 ZNF143 GTRD no Epithelial (MCF-7) 21380797
chr1 218645933 218646904 ZNF143 GTRD no Epithelial (MCF-7) 21380798
chr1 218645951 218646937 ZNF143 GTRD no Epithelial (MCF-7) 21380799
chr1 218645952 218647065 ZNF143 GTRD no Epithelial (MCF-7) 21380800
chr1 218645952 218647065 ZNF143 GTRD no Epithelial (MCF-7) 107870361
chr1 218646002 218647162 ZNF143 GTRD no Epithelial (MCF-7) 21380801
chr1 218646002 218647162 ZNF143 GTRD no Epithelial (MCF-7) 107870362
chr1 218646004 218647232 ZBTB33 GTRD no Lung (A549) 107870363
chr1 218646045 218646835 ZNF143 GTRD no Epithelial (MCF-7) 21380802
chr1 218646063 218646809 ZNF143 GTRD no Epithelial (MCF-7) 21380803
chr1 218646064 218646937 ZNF143 GTRD no Epithelial (MCF-7) 21380804
chr1 218646080 218646881 ZNF143 GTRD no Epithelial (MCF-7) 21380805
chr1 218646123 218646886 ZNF143 GTRD no Epithelial (MCF-7) 21380806
chr1 218646126 218646756 ZNF143 GTRD no Epithelial (MCF-7) 21380807
chr1 218646128 218646715 ZNF143 GTRD no Epithelial (MCF-7) 21380808
chr1 218646140 218646830 ZNF143 GTRD no Epithelial (MCF-7) 21380809
chr1 218646143 218646778 ZNF143 GTRD no Epithelial (MCF-7) 21380810
chr1 218646143 218647009 ZNF143 GTRD no Epithelial (MCF-7) 21380811
chr1 218646146 218646846 ZNF143 GTRD no Epithelial (MCF-7) 21380812
chr1 218646148 218646544 ZNF143 GTRD no Epithelial (MCF-7) 21380813
chr1 218646196 218646698 ZNF143 GTRD no Epithelial (MCF-7) 21380814
chr1 218646221 218647043 ZNF274 GTRD no Liver (HepG2) 107870364
chr1 218646286 218646929 ZNF143 GTRD no Epithelial (MCF-7) 21380815
chr1 218646317 218647027 ZNF274 GTRD no Liver (HepG2) 107870365
chr1 218646330 218646884 ZNF143 GTRD no Epithelial (MCF-7) 21380816
chr1 218646410 218646425 PRDM1 JASPAR yes 35383160
Genes associated with rs533508559[chr1:218646410], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More