EnhancerDB
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  3. rs533523579[chr1:25105030]
Enhancers that have rs533523579[chr1:25105030]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25085286 25108435 enh141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs533523579[chr1:25105030]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25105014 25105035 IRF1 JASPAR yes 27531033
chr1 25105016 25105031 FOXP1 JASPAR yes 27531034
chr1 25105018 25105039 IRF1 JASPAR yes 27531035
chr1 25105026 25105041 PRDM1 JASPAR yes 27531036
Genes associated with rs533523579[chr1:25105030], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More