EnhancerDB
  1. Home
  2. SNP
  3. rs533639876[chr17:55534277]
Enhancers that have rs533639876[chr17:55534277]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs533639876[chr17:55534277]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55534267 55534278 E2F6 JASPAR yes 54956254
chr17 55534267 55534281 E2F7 JASPAR yes 54956255
chr17 55534268 55534280 E2F8 JASPAR yes 54956256
chr17 55534276 55534280 H1TF2 TRANSFAC yes 54956257
chr17 55534276 55534280 NFE TRANSFAC yes 54956258
chr17 55534276 55534280 SRF TRANSFAC yes 54956259
Genes associated with rs533639876[chr17:55534277], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More