EnhancerDB
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  3. rs533740882[chr17:2769519]
Enhancers that have rs533740882[chr17:2769519]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs533740882[chr17:2769519]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2769512 2769527 FOXP1 JASPAR yes 52779374
chr17 2769515 2769523 GATA3 JASPAR yes 52779375
chr17 2769516 2769531 FOXP1 JASPAR yes 52779376
chr17 2769518 2769524 TBP TRANSFAC yes 52779377
chr17 2769519 2769530 FOXP2 JASPAR yes 52779378
Genes associated with rs533740882[chr17:2769519], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More