EnhancerDB
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  3. rs533818786[chr1:234684993]
Enhancers that have rs533818786[chr1:234684993]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234649189 234693444 enh991
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs533818786[chr1:234684993]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234683636 234685965 TEF1 GTRD no Bone (Osteoblast) 21394369
chr1 234683815 234685462 ZNF274 GTRD no Cervix (HeLa-S3) 21394374
chr1 234683963 234685210 ZNF274 GTRD no Cervix (HeLa-S3) 21394400
chr1 234684012 234685126 ZNF274 GTRD no Liver (HepG2) 21394406
chr1 234684819 234685256 ZNF274 GTRD no Liver (HepG2) 21394489
chr1 234684858 234685226 ZNF143 GTRD no Epithelial (MCF-7) 21394490
chr1 234684891 234685277 ZNF274 GTRD no Liver (HepG2) 21394491
chr1 234684937 234685153 ZNF274 GTRD no Liver (HepG2) 21394492
chr1 234684981 234684996 FOXA1 JASPAR yes 36287203
chr1 234684982 234684993 FOXC1 JASPAR yes 36287204
chr1 234684991 234685006 PRDM1 JASPAR yes 36287205
chr1 234684992 234684996 YY1 TRANSFAC yes 36287206
Genes associated with rs533818786[chr1:234684993], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More