EnhancerDB
  1. Home
  2. SNP
  3. rs533890602[chr12:46888916]
Enhancers that have rs533890602[chr12:46888916]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46872285 46895935 enh14678
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Lung Stomach Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs533890602[chr12:46888916]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46888519 46888980 ZNF274 GTRD no Liver (HepG2) 21542086
chr12 46888519 46888980 ZNF274 GTRD no Liver (HepG2) 108027658
chr12 46888582 46888927 ZNF274 GTRD no Liver (HepG2) 21542087
chr12 46888651 46888959 ZNF274 GTRD no Liver (HepG2) 21542088
chr12 46888915 46888922 NKX3-1 JASPAR yes 120629707
Genes associated with rs533890602[chr12:46888916], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More