EnhancerDB
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  3. rs533903727[chr12:109062838]
Enhancers that have rs533903727[chr12:109062838]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109055765 109067015 enh2584
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs533903727[chr12:109062838]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109062834 109062848 TCF7L2 JASPAR yes 123611058
chr12 109062834 109062849 LEF1 JASPAR yes 123611059
chr12 109062838 109062844 TCF4 TRANSFAC yes 123611060
Genes associated with rs533903727[chr12:109062838], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More