EnhancerDB
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  3. rs533945278[chr1:24620390]
Enhancers that have rs533945278[chr1:24620390]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs533945278[chr1:24620390]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24620381 24620401 RREB1 JASPAR yes 27497077
chr1 24620388 24620399 E2F6 JASPAR yes 27497078
chr1 24620390 24620409 PAX5 JASPAR yes 27497079
Genes associated with rs533945278[chr1:24620390], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More