EnhancerDB
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  3. rs533966332[chr17:42176258]
Enhancers that have rs533966332[chr17:42176258]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs533966332[chr17:42176258]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42176250 42176261 E2F1 JASPAR yes 54386868
chr17 42176251 42176262 E2F4 JASPAR yes 54386870
chr17 42176251 42176262 E2F6 JASPAR yes 54386871
chr17 42176258 42176275 RARA JASPAR yes 54386873
Genes associated with rs533966332[chr17:42176258], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More