EnhancerDB
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  3. rs533999868[chr2:240202398]
Enhancers that have rs533999868[chr2:240202398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 240201720 240202445 vista35502
VISTA
Transcript factors that have rs533999868[chr2:240202398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240202394 240202400 YY1 JASPAR yes 22245967
chr2 240202394 240202400 YY1 JASPAR yes 82225401
Genes associated with rs533999868[chr2:240202398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More