EnhancerDB
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  3. rs534010994[chr17:41486087]
Enhancers that have rs534010994[chr17:41486087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41479046 41498765 enh17167
Brain (SK-N-MC) Astrocyte Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs534010994[chr17:41486087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41486069 41486090 IRF1 JASPAR yes 54343203
chr17 41486074 41486095 IRF1 JASPAR yes 54343206
chr17 41486075 41486090 FOXP1 JASPAR yes 54343207
chr17 41486076 41486091 STAT2 JASPAR yes 54343208
chr17 41486079 41486100 IRF1 JASPAR yes 54343209
chr17 41486080 41486095 FOXP1 JASPAR yes 54343210
chr17 41486081 41486096 STAT2 JASPAR yes 54343211
chr17 41486084 41486105 IRF1 JASPAR yes 54343212
chr17 41486085 41486100 FOXP1 JASPAR yes 54343213
chr17 41486086 41486101 STAT2 JASPAR yes 54343214
Genes associated with rs534010994[chr17:41486087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More