EnhancerDB
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  3. rs534067869[chr16:89517444]
Enhancers that have rs534067869[chr16:89517444]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89499432 89527658 enh16907
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534067869[chr16:89517444]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89517433 89517444 HOXA10 JASPAR yes 12346069
chr16 89517434 89517445 CDX2 JASPAR yes 12346071
chr16 89517439 89517453 TLX1 JASPAR yes 12346072
Genes associated with rs534067869[chr16:89517444], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More