EnhancerDB
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  3. rs534123784[chr6:16337539]
Enhancers that have rs534123784[chr6:16337539]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16329544 16348350 enh8975
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534123784[chr6:16337539]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16337538 16337549 USF1 JASPAR yes 100289052
chr6 16337538 16338002 POLR2A UCSC Txn Factor no Conserved 108538867
chr6 16337539 16337549 NEUROD2 JASPAR yes 100289053
chr6 16337539 16337550 USF1 JASPAR yes 100289054
chr6 16337539 16337550 USF2 JASPAR yes 100289055
Genes associated with rs534123784[chr6:16337539], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More