EnhancerDB
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  3. rs534141240[chr17:57433513]
Enhancers that have rs534141240[chr17:57433513]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57433402 57461748 enh17258
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs534141240[chr17:57433513]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57430101 57434473 ZNF143 GTRD no Epithelial (MCF-7) 21774768
chr17 57430101 57434473 ZNF143 GTRD no Epithelial (MCF-7) 21774769
chr17 57430101 57434473 ZNF143 GTRD no Epithelial (MCF-7) 108275799
chr17 57433512 57433525 DUXA JASPAR yes 55051478
chr17 57433513 57433524 DUX4 JASPAR yes 55051479
Genes associated with rs534141240[chr17:57433513], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More