EnhancerDB
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  3. rs534200947[chr12:111866673]
Enhancers that have rs534200947[chr12:111866673]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 111858009 111880135 enh2602
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs534200947[chr12:111866673]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 111866300 111867054 TEF1 GTRD no Bone (Osteoblast) 21573710
chr12 111866300 111867054 TEF1 GTRD no Bone (Osteoblast) 108059718
chr12 111866430 111866773 ZNF274 GTRD no Bone Marrow (K562) 21573711
chr12 111866430 111866773 ZNF274 GTRD no Bone Marrow (K562) 108059719
chr12 111866449 111866943 ZBTB33 GTRD no Lung (A549) 108059720
chr12 111866486 111866922 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21573712
chr12 111866486 111866922 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108059721
chr12 111866505 111866867 ZNF143 GTRD no Epithelial (MCF-7) 108059722
chr12 111866531 111866778 ZNF274 GTRD no Liver (HepG2) 21573713
chr12 111866531 111866778 ZNF274 GTRD no Liver (HepG2) 108059723
chr12 111866593 111866963 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21573714
chr12 111866593 111866963 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108059724
chr12 111866604 111866984 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21573715
chr12 111866604 111866984 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108059725
chr12 111866654 111866675 IRF1 JASPAR yes 123747332
Genes associated with rs534200947[chr12:111866673], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More