EnhancerDB
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  3. rs534230584[chr2:240180011]
Enhancers that have rs534230584[chr2:240180011]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534230584[chr2:240180011]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240179319 240180141 SETDB1 UCSC Txn Factor no Conserved 108436007
chr2 240180007 240180020 NR2F1 JASPAR yes 82222234
chr2 240180010 240180027 RXRA JASPAR yes 82222235
chr2 240180011 240180015 ESR1 TRANSFAC yes 82222236
Genes associated with rs534230584[chr2:240180011], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More