EnhancerDB
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  3. rs534247349[chr2:27923881]
Enhancers that have rs534247349[chr2:27923881]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 27922526 27936875 enh18375
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs534247349[chr2:27923881]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 27923869 27923890 IRF1 JASPAR yes 72582454
chr2 27923871 27923886 STAT2 JASPAR yes 72582455
chr2 27923873 27923885 IRF1 JASPAR yes 72582456
Genes associated with rs534247349[chr2:27923881], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More