EnhancerDB
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  3. rs534259718[chr17:2776402]
Enhancers that have rs534259718[chr17:2776402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs534259718[chr17:2776402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2776393 2776408 FOXP1 JASPAR yes 52780420
chr17 2776394 2776409 FOXP1 JASPAR yes 52780421
chr17 2776394 2776415 IRF1 JASPAR yes 52780422
chr17 2776395 2776410 FOXP1 JASPAR yes 52780423
chr17 2776400 2776421 IRF1 JASPAR yes 52780424
Genes associated with rs534259718[chr17:2776402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More