EnhancerDB
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  3. rs534316467[chr17:80491357]
Enhancers that have rs534316467[chr17:80491357]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534316467[chr17:80491357]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80491351 80491358 JUN TRANSFAC yes 56371314
chr17 80491351 80491358 SP1 TRANSFAC yes 56371315
chr17 80491356 80491362 SOX10 JASPAR yes 56371316
Genes associated with rs534316467[chr17:80491357], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More