EnhancerDB
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  3. rs534338580[chr17:2771367]
Enhancers that have rs534338580[chr17:2771367]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs534338580[chr17:2771367]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2770962 2771558 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108231303
chr17 2771292 2771660 ZNF143 GTRD no Epithelial (MCF-7) 21739733
chr17 2771292 2771660 ZNF143 GTRD no Epithelial (MCF-7) 108231304
chr17 2771309 2771599 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21739734
chr17 2771309 2771599 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108231305
chr17 2771310 2771686 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108231306
chr17 2771314 2771564 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108231307
Genes associated with rs534338580[chr17:2771367], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More