EnhancerDB
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  3. rs534339198[chr1:19718710]
Enhancers that have rs534339198[chr1:19718710]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534339198[chr1:19718710]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19718700 19718713 ELF1 JASPAR yes 27184485
chr1 19718703 19718714 ELK4 JASPAR yes 27184486
chr1 19718703 19718714 FLI1 JASPAR yes 27184487
chr1 19718705 19718719 STAT1 JASPAR yes 27184488
Genes associated with rs534339198[chr1:19718710], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More