EnhancerDB
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  3. rs534340064[chr2:27927839]
Enhancers that have rs534340064[chr2:27927839]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 27922526 27936875 enh18375
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs534340064[chr2:27927839]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 27927837 27927841 NFE TRANSFAC yes 72583006
chr2 27927837 27927842 GATA1 TRANSFAC yes 72583007
chr2 27927837 27927843 GATA3 JASPAR yes 72583008
Genes associated with rs534340064[chr2:27927839], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More