EnhancerDB
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  3. rs534346554[chr11:12839002]
Enhancers that have rs534346554[chr11:12839002]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12804154 12848277 enh13788
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534346554[chr11:12839002]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12838994 12839005 FOXB1 JASPAR yes 37481603
chr11 12838994 12839005 FOXC1 JASPAR yes 37481604
chr11 12838994 12839006 FOXC2 JASPAR yes 37481605
chr11 12838995 12839006 FOXP2 JASPAR yes 37481606
chr11 12838996 12839004 FOXO3 JASPAR yes 37481607
chr11 12838997 12839004 FOXD2 JASPAR yes 37481608
chr11 12838997 12839004 FOXI1 JASPAR yes 37481609
chr11 12838997 12839004 FOXL1 JASPAR yes 37481610
chr11 12838997 12839004 FOXO4 JASPAR yes 37481611
chr11 12838997 12839004 FOXO6 JASPAR yes 37481612
chr11 12838997 12839004 FOXP3 JASPAR yes 37481613
chr11 12838997 12839005 FOXD1 JASPAR yes 37481614
chr11 12838997 12839005 FOXG1 JASPAR yes 37481615
chr11 12838997 12839005 FOXO3 JASPAR yes 37481616
chr11 12839001 12839016 PRDM1 JASPAR yes 37481617
chr11 12839002 12839006 YY1 TRANSFAC yes 37481618
chr11 12839002 12839016 STAT1 JASPAR yes 37481619
Genes associated with rs534346554[chr11:12839002], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More