EnhancerDB
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  3. rs534407892[chr16:4332513]
Enhancers that have rs534407892[chr16:4332513]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs534407892[chr16:4332513]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4331935 4333290 TCF7L2 GTRD no Colon (HCT116) 21686278
chr16 4331940 4333630 ZNF143 GTRD no Epithelial (MCF-7) 21686279
chr16 4331940 4333886 ZNF143 GTRD no Epithelial (MCF-7) 21686280
chr16 4332022 4333423 TCF7L2 GTRD no Colon (HCT116) 21686281
chr16 4332325 4332605 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686282
chr16 4332475 4332659 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21686283
chr16 4332504 4332514 NHLH1 JASPAR yes 9265817
chr16 4332511 4332525 RORA JASPAR yes 9265818
chr16 4332512 4332522 RORA JASPAR yes 9265819
Genes associated with rs534407892[chr16:4332513], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More