EnhancerDB
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  3. rs534456957[chr1:19758051]
Enhancers that have rs534456957[chr1:19758051]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534456957[chr1:19758051]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19758046 19758061 MEF2C JASPAR yes 27189306
chr1 19758047 19758062 MEF2A JASPAR yes 27189307
chr1 19758048 19758060 MEF2A JASPAR yes 27189308
chr1 19758048 19758060 MEF2B JASPAR yes 27189309
chr1 19758048 19758060 MEF2D JASPAR yes 27189310
Genes associated with rs534456957[chr1:19758051], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More