EnhancerDB
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  3. rs534458078[chr16:85269659]
Enhancers that have rs534458078[chr16:85269659]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534458078[chr16:85269659]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85269120 85269720 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21721772
chr16 85269299 85269669 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21721775
chr16 85269325 85269701 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21721777
chr16 85269368 85269704 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21721781
chr16 85269375 85269685 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21721782
chr16 85269501 85269950 TCF7L2 GTRD no Colon (HCT116) 21721788
chr16 85269575 85271034 ZBTB33 GTRD no Brain (SK-N-SH) 21721789
Genes associated with rs534458078[chr16:85269659], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More