EnhancerDB
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  3. rs534494933[chr1:235148486]
Enhancers that have rs534494933[chr1:235148486]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs534494933[chr1:235148486]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235146383 235149741 POLR2A UCSC Txn Factor no Conserved 107885561
chr1 235146795 235149741 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402975
chr1 235146795 235149741 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885567
chr1 235148284 235148644 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21403115
chr1 235148477 235148492 AR JASPAR yes 36342179
chr1 235148477 235148494 NR3C2 JASPAR yes 36342180
chr1 235148479 235148494 AR JASPAR yes 36342181
chr1 235148486 235148490 NFE TRANSFAC yes 36342182
Genes associated with rs534494933[chr1:235148486], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More