EnhancerDB
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  3. rs534503342[chr12:125255785]
Enhancers that have rs534503342[chr12:125255785]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs534503342[chr12:125255785]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125255436 125255812 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582994
chr12 125255765 125255786 IRF1 JASPAR yes 124420343
chr12 125255770 125255791 IRF1 JASPAR yes 124420346
chr12 125255771 125255786 FOXP1 JASPAR yes 124420347
chr12 125255772 125255787 STAT2 JASPAR yes 124420348
chr12 125255776 125255791 FOXP1 JASPAR yes 124420349
Genes associated with rs534503342[chr12:125255785], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More